UBAM to FASTQ + prealignment QC
Ion Torrent Data can be in the unaligned bam (UBAM) file format. Since most data analysis is done in the FASTQ format, these files can be converted to FASTQ using this pipeline. This pipeline will show up if the selected data node is an unaligned BAM data node.  Once it is converted to FASTQ, it can be aligned using various aligners available in Partek Flow or it can be fed to another pipeline.