Single Cell Analysis – Differential Gene Expression

Single Cell Analysis – Differential Gene Expression

In Part I of our single cell analysis series, we introduced the Partek single-cell toolkit and focused on identification and characterization of cell populations. In this webinar, we will demonstrate how to handle a more complex study design, with multiple biological replicates, and how to detect genes that are differentially expressed between single-cell populations.

Agenda

• Cell filtering using interactive QC charts
• Identifying cell populations by t-SNE plot
• Pooling cells of the same type across multiple samples
• Detecting differentially expressed genes
• Visualizing transcription profiles by heat map
• Biological interpretation by GO or pathway enrichment

Our Single Cell Webinar Series